BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021F05LP1|AL427786
(949 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1494 1829 0.0
>3x_Contig1494
Length = 10561
Score = 1829 bits (922), Expect = 0.0
Identities = 947/952 (99%), Gaps = 3/952 (0%)
Strand = Plus / Minus
Query: 1 attactggtgctccagcagccttttctccaacctgttctgtttctcacattccaggttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7148 attactggtgctccagcagccttttctccaacctgttctgtttctcacattccaggttac 7089
Query: 61 gttcaaaagttgaaccaattggtcgatgccggtgcatctcaagtcttcgttgttactgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7088 gttcaaaagttgaaccaattggtcgatgccggtgcatctcaagtcttcgttgttactgct 7029
Query: 121 gacaatccatttgctaaccaacaatgggccaagactctaggtgtcaaggataccgacaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7028 gacaatccatttgctaaccaacaatgggccaagactctaggtgtcaaggataccgacaag 6969
Query: 181 atcaagttcatcactgatgccggtgccaagttttcccaatctttgggctttgccttgcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6968 atcaagttcatcactgatgccggtgccaagttttcccaatctttgggctttgccttgcca 6909
Query: 241 attgagtccggcgttttctgggccagcagatacttggtaattgccaaggatgggaagatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6908 attgagtccggcgttttctgggccagcagatacttggtaattgccaaggatgggaagatt 6849
Query: 301 gtttaccaagccgttgaagaaaacccagctactgatgttacagtttcttccgttgataat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6848 gtttaccaagccgttgaagaaaacccagctactgatgttacagtttcttccgttgataat 6789
Query: 361 gccttggaacaattgaacaagattaaatagagagaaaaataactataatactattaagta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6788 gccttggaacaattgaacaagattaaatagagagaaaaataactataatactattaagta 6729
Query: 421 gtcaatattaacgtacattacttccttctacctttaacccttagcttcactttgagtagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6728 gtcaatattaacgtacattacttccttctacctttaacccttagcttcactttgagtagg 6669
Query: 481 gaggttcaaaacggaaacggcatttttttatttcagtcaacaatttagaaggatagatca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6668 gaggttcaaaacggaaacggcatttttttatttcagtcaacaatttagaaggatagatca 6609
Query: 541 atatataaatgtacatacatatggaaacataaatgtgcaatgatgagaaatacatttgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6608 atatataaatgtacatacatatggaaacataaatgtgcaatgatgagaaatacatttgaa 6549
Query: 601 caacagaaatttcaacaaaaccaattgtctaatctgtagcatagaaagcaaaacgctttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6548 caacagaaatttcaacaaaaccaattgtctaatctgtagcatagaaagcaaaacgctttg 6489
Query: 661 ttgaaatagaaatcattcaaagtctcaacagtttataatatctctttaatccctcctgat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6488 ttgaaatagaaatcattcaaagtctcaacagtttataatatctctttaatccctcctgat 6429
Query: 721 cgtgaaactagatccattcaaaaacggaaaaagtagaaataaaaataaaaaggaaaagga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6428 cgtgaaactagatccattcaaaaacggaaaaagtagaaataaaaataaaaaggaaaagga 6369
Query: 781 aaaaaaaataacgagtttcgttggg-aaaccctcgagtctgtagttgaaagttgtaatgg 839
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 6368 aaaaaaaataacgagtttcgttgggaaaaccctcgagtctgtagttgaaagttgtaatgg 6309
Query: 840 taacgtgacgatcgaaggaattcaatctctctcgtgtgttagcccaccaacaaaaaacat 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6308 taacgtgacgatcgaaggaattcaatctctctcgtgtgttagcccaccaacaaaaaacat 6249
Query: 900 gtttacacgtgtgg-ttgggaactc-aaaaaaaaaacttaccaaaaggktgt 949
|||||||||||||| |||| ||||| |||||||||||||||||||||| |||
Sbjct: 6248 gtttacacgtgtggtttggaaactcaaaaaaaaaaacttaccaaaaggttgt 6197
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,140
Number of Sequences: 1807
Number of extensions: 11140
Number of successful extensions: 127
Number of sequences better than 1.0e-20: 1
length of query: 949
length of database: 10,358,551
effective HSP length: 16
effective length of query: 933
effective length of database: 10,329,639
effective search space: 9637553187
effective search space used: 9637553187
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)